Library Sizes ranged between 31,935,329 and 38,749,691 reads.
Read totals for each library. Duplicated reads are conventionally an high overestimate at this point.
Summary of FastQC flags for each parameter
Heatmap showing mean base qualities for each library
Heatmap showing mean sequence qualities for each library
Heatmap of summed base distributions along each read
GC Content Heatmap normalised to theoretical GC content in the Drerio Transcriptome
GC Content Distributions for all reads showing theoretical GC content from the Drerio Transcriptome
Universal Adapter Content
Total overrepresented sequences for each library
## Overrepresented_sequences missing from SRR11951228Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951229Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951230Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951231Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951232Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951233Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951234Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951235Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951236Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951237Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951238Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951239Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951240Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951241Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951242Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951243Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951244Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951245Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951246Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951247Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951248Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951249Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951250Aligned.sortedByCoord.out.bam## Overrepresented_sequences missing from SRR11951251Aligned.sortedByCoord.out.bam## No overrepresented sequences were detected by FastQCR version 4.1.0 (2021-05-18)
Platform: x86_64-pc-linux-gnu (64-bit)
locale: LC_CTYPE=en_AU.UTF-8, LC_NUMERIC=C, LC_TIME=en_AU.UTF-8, LC_COLLATE=en_AU.UTF-8, LC_MONETARY=en_AU.UTF-8, LC_MESSAGES=en_AU.UTF-8, LC_PAPER=en_AU.UTF-8, LC_NAME=C, LC_ADDRESS=C, LC_TELEPHONE=C, LC_MEASUREMENT=en_AU.UTF-8 and LC_IDENTIFICATION=C
attached base packages: parallel, stats, graphics, grDevices, utils, datasets, methods and base
other attached packages: pander(v.0.6.4), DT(v.0.18), scales(v.1.1.1), readr(v.1.4.0), dplyr(v.1.0.7), stringr(v.1.4.0), magrittr(v.2.0.1), ngsReports(v.1.8.1), tibble(v.3.1.2), ggplot2(v.3.3.5) and BiocGenerics(v.0.38.0)
loaded via a namespace (and not attached): Rcpp(v.1.0.7), lubridate(v.1.7.10), here(v.1.0.1), lattice(v.0.20-44), tidyr(v.1.1.3), Biostrings(v.2.60.1), zoo(v.1.8-9), assertthat(v.0.2.1), rprojroot(v.2.0.2), digest(v.0.6.27), utf8(v.1.2.1), plyr(v.1.8.6), R6(v.2.5.0), GenomeInfoDb(v.1.28.1), stats4(v.4.1.0), evaluate(v.0.14), httr(v.1.4.2), pillar(v.1.6.1), zlibbioc(v.1.38.0), rlang(v.0.4.11), lazyeval(v.0.2.2), rstudioapi(v.0.13), data.table(v.1.14.0), jquerylib(v.0.1.4), S4Vectors(v.0.30.0), rmarkdown(v.2.9), labeling(v.0.4.2), htmlwidgets(v.1.5.3), RCurl(v.1.98-1.3), munsell(v.0.5.0), compiler(v.4.1.0), xfun(v.0.24), pkgconfig(v.2.0.3), htmltools(v.0.5.1.1), tidyselect(v.1.1.1), GenomeInfoDbData(v.1.2.6), IRanges(v.2.26.0), fansi(v.0.5.0), viridisLite(v.0.4.0), crayon(v.1.4.1), withr(v.2.4.2), MASS(v.7.3-54), bitops(v.1.0-7), grid(v.4.1.0), jsonlite(v.1.7.2), gtable(v.0.3.0), lifecycle(v.1.0.0), DBI(v.1.1.1), stringi(v.1.6.2), farver(v.2.1.0), reshape2(v.1.4.4), XVector(v.0.32.0), bslib(v.0.2.5.1), ellipsis(v.0.3.2), ggdendro(v.0.1.22), generics(v.0.1.0), vctrs(v.0.3.8), RColorBrewer(v.1.1-2), tools(v.4.1.0), forcats(v.0.5.1), glue(v.1.4.2), purrr(v.0.3.4), crosstalk(v.1.1.1), hms(v.1.1.0), yaml(v.2.2.1), colorspace(v.2.0-2), BiocManager(v.1.30.16), plotly(v.4.9.4.1), knitr(v.1.33) and sass(v.0.4.0)